Aflakian, F., N. Mohseni, M. Hafiz, H. Nikoueian and M. Askari. (2023). Phenotypic and genotypic investigation of antimicrobial resistance and extended-spectrum beta-lactamase production among Escherichia coli isolated from bovine mastitis. VETERINARSKI ARHIV 93: 503-512.
Aguirre-Sánchez, J. R., J. B. Valdez-Torres, N. C. Del Campo, J. Martínez-Urtaza, N. C. Del Campo, B. G. Lee, et al. (2022). Phylogenetic group and virulence profile classification in Escherichia coli from distinct isolation sources in Mexico. Infection, Genetics and Evolution 106: 105380.
Assoumy, M. A., A. P. Bedekelabou, A. Teko-Agbo, W. Ossebi, K. Akoda, F. Nimbona, et al. (2021). Antibiotic resistance of Escherichia coli and Salmonella spp. strains isolated from healthy poultry farms in the districts of Abidjan and Agnibilékrou (Côte d’Ivoire). Veterinary World 14: 1020.
Aswal, M., N. Singhal and M. Kumar. (2023). Genomic analysis of phylogroup D Escherichia coli strains using novel de-novo reference-based guided assembly. Scientific Data 10: 573.
Aworh, M. K., J. Kwaga, E. Okolocha, L. Harden, D. Hull, R. S. Hendriksen, et al. (2020). Extended-spectrum ß-lactamase-producing Escherichia coli among humans, chickens and poultry environments in Abuja, Nigeria. One Health Outlook 2: 1-11.
Aworh, M. K., J. K. Kwaga, R. S. Hendriksen, E. C. Okolocha and S. Thakur. (2021). Genetic relatedness of multidrug resistant Escherichia coli isolated from humans, chickens and poultry environments. Antimicrobial Resistance & Infection Control 10: 1-13.
Badr, H., R. M. Reda, N. M. Hagag, E. Kamel, S. M. Elnomrosy, A. I. Mansour, et al. (2022). Multidrug-resistant and genetic characterization of extended-spectrum beta-lactamase-producing E. coli recovered from chickens and humans in Egypt. Animals 12: 346.
Baran, A., M. Adıgüzel and M. Yüksel. (2020). Prevalence of antibiotic-resistant and extended-spectrum beta-lactamase-producing Escherichia coli in chicken meat from eastern Turkey. Pakistan Veterinary Journal 40.
Becker, E., M. Projahn, E. Burow and A. Käsbohrer. (2021). Are there effective intervention measures in broiler production against the ESBL/AmpC producer Escherichia coli? Pathogens 10: 608.
Bhowmik, A., S. T. Shah, S. Goswami, A. S. Sirajee and S. Ahsan. (2023). Predominance of multidrug resistant Escherichia coli of environmental phylotype in different environments of Dhaka, Bangladesh. Tropical Medicine and Infectious Disease 8: 226.
Clermont, O., J. K. Christenson, E. Denamur and D. M. Gordon. (2013). The C lermont E scherichia coli phylo‐typing method revisited: improvement of specificity and detection of new phylo‐groups. Environmental microbiology reports 5: 58-65.
Clermont, O., O. V. Dixit, B. Vangchhia, B. Condamine, S. Dion, A. Bridier‐Nahmias, et al. (2019). Characterization and rapid identification of phylogroup G in Escherichia coli, a lineage with high virulence and antibiotic resistance potential. Environmental microbiology 21: 3107-3117.
CLSI. Performance Standards for Antimicrobial Susceptibilty Testing. 33rd ed. CLSI supplement M100. . Clinical Laboratory Standard Institute; (2023).
Coura, F. M., S. A. Diniz, M. X. Silva, T. L. Arcebismo, S. Minharro, A. C. Feitosa, et al. (2017). Phylogenetic group of Escherichia coli isolates from broilers in Brazilian poultry slaughterhouse. The Scientific World Journal 2017.
Dallenne, C., A. Da Costa, D. Decré, C. Favier and G. Arlet. (2010). Development of a set of multiplex PCR assays for the detection of genes encoding important β-lactamases in Enterobacteriaceae. Journal of antimicrobial chemotherapy 65: 490-495.
de Mesquita Souza Saraiva, M., K. Lim, D. F. M. do Monte, P. E. N. Givisiez, L. B. R. Alves, O. C. de Freitas Neto, et al. (2022). Antimicrobial resistance in the globalized food chain: A One Health perspective applied to the poultry industry. Brazilian Journal of Microbiology: 1-22.
Deku, J. G., K. O. Duedu, S. Kinanyok, G. E. Kpene and P. K. Feglo. (2022). Phylogenicity and virulence profiles of clinical Escherichia coli isolates in the Ho teaching hospital of Ghana. BioMed Research International 2022: 1-8.
Economou, V., G. Delis, D. Stavrou, P. Gousia, A. Tsitsos, T. Mantzios, et al. (2023). Characterization of extended spectrum cephalosporin-resistant Escherichia coli strains isolated from raw poultry carcasses in catering services in Northern Greece. Veterinary Sciences 10: 487.
Elmi, S. A., D. Simons, L. Elton, N. Haider, M. M. Abdel Hamid, Y. A. Shuaib, et al. (2021). Identification of risk factors associated with resistant escherichia coli isolates from poultry farms in the east coast of peninsular malaysia: A cross sectional study. Antibiotics 10: 117.
Fuga, B., F. P. Sellera, L. Cerdeira, F. Esposito, B. Cardoso, H. Fontana, et al. (2022). WHO critical priority Escherichia coli as one health challenge for a post-pandemic scenario: genomic surveillance and analysis of current trends in Brazil. Microbiology spectrum 10: e01256-21.
Gatya Al-Mayahie, S. M., D. R. d. T. Al-Guranie, A. A. Hussein and Z. A. Bachai. (2022). Prevalence of common carbapenemase genes and multidrug resistance among uropathogenic Escherichia coli phylogroup B2 isolates from outpatients in Wasit Province/Iraq. PloS one 17: e0262984.
Ilyas, S., M. H. Rasool, M. J. Arshed, M. U. Qamar, B. Aslam, A. Almatroudi, et al. (2021). The Escherichia coli sequence type 131 harboring extended-spectrum beta-lactamases and carbapenemases genes from poultry birds. Infection and Drug Resistance: 805-813.
Jafari, E., S. Mostaan and S. Bouzari. (2020). Characterization of antimicrobial susceptibility, extended-spectrum β-lactamase genes and phylogenetic groups of enteropathogenic Escherichia coli isolated from patients with diarrhea. Osong Public Health and Research Perspectives 11: 327.
Johnson, J. R., P. Delavari, M. Kuskowski and A. L. Stell. (2001). Phylogenetic distribution of extraintestinal virulence-associated traits in Escherichia coli. The Journal of infectious diseases 183: 78-88.
Kim, H., Y. A. Kim, Y. H. Seo, H. Lee and K. Lee. (2021). Prevalence and molecular epidemiology of extended-spectrum-β-lactamase (ESBL)-producing Escherichia coli from multiple sectors of poultry industry in Korea. Antibiotics 10: 1050.
Klimienė, I., M. Virgailis, S. Kerzienė, R. Šiugždinienė, R. Mockeliūnas and M. Ružauskas. (2018). Evaluation of genotypical antimicrobial resistance in ESBL producing Escherichia coli phylogenetic groups isolated from retail poultry meat. Journal of Food Safety 38: e12370.
Koutsianos, D., L. V. Athanasiou, D. Mossialos, G. Franzo, M. Cecchinato and K. C. Koutoulis. (2022). Investigation of serotype prevalence of Escherichia coli strains isolated from layer poultry in Greece and interactions with other infectious agents. Veterinary Sciences 9: 152.
Lagerstrom, K. M. and E. A. Hadly. (2023). Under-Appreciated Phylogroup Diversity of Escherichia coli within and between Animals at the Urban-Wildland Interface. Applied and Environmental Microbiology: e00142-23.
Marin, J., O. Clermont, G. Royer, M. Mercier-Darty, J. W. Decousser, O. Tenaillon, et al. (2022). The population genomics of increased virulence and antibiotic resistance in human commensal Escherichia coli over 30 years in France. Applied and environmental microbiology 88: e00664-22.
Mehdi, Y., M.-P. Létourneau-Montminy, M.-L. Gaucher, Y. Chorfi, G. Suresh, T. Rouissi, et al. (2018). Use of antibiotics in broiler production: Global impacts and alternatives. Animal nutrition 4: 170-178.
Mgaya, F. X., M. I. Matee, A. P. Muhairwa and A. S. Hoza. (2021). Occurrence of multidrug resistant Escherichia coli in raw meat and cloaca swabs in poultry processed in slaughter slabs in Dar es Salaam, Tanzania. Antibiotics 10: 343.
Misumi, W., A. Magome, E. Okuhama, E. Uchimura, Y. Tamamura-Andoh, Y. Watanabe, et al. (2023). CTX-M-55-type ESBL-producing fluoroquinolone-resistant Escherichia coli sequence type 23 repeatedly caused avian colibacillosis in Kagoshima Prefecture, Japan. Journal of Global Antimicrobial Resistance 35: 325-331.
Mitman, S. L., H. K. Amato, C. Saraiva-Garcia, F. Loayza, L. Salinas, K. Kurowski, et al. (2022). Risk factors for third-generation cephalosporin-resistant and extended-spectrum β-lactamase-producing Escherichia coli carriage in domestic animals of semirural parishes east of Quito, Ecuador. PLOS Global Public Health 2: e0000206.
Muhammad, J., S. Khan, J. Q. Su, A. E.-L. Hesham, A. Ditta, J. Nawab, et al. (2020). Antibiotics in poultry manure and their associated health issues: a systematic review. Journal of Soils and Sediments 20: 486-497.
Murase, T. and H. Ozaki. (2022). Relationship between phylogenetic groups of Escherichia coli and Pathogenicity among Isolates from chickens with Colibacillosis and healthy chickens. Poultry Science 101: 102007.
Olowe, O. A., O. J. Adefioye, T. A. Ajayeoba, J. Schiebel, J. Weinreich, A. Ali, et al. (2019). Phylogenetic grouping and biofilm formation of multidrug resistant Escherichia coli isolates from humans, animals and food products in South-West Nigeria. Scientific African 6: e00158.
Organization, W. H. (2021). The selection and use of essential medicines: report of the WHO Expert Committee on Selection and Use of Essential Medicines, 2021 (including the 22nd WHO model list of essential medicines and the 8th WHO model list of essential medicines for children).
Rahman, M. R. T., I. Fliss and E. Biron. (2022). Insights in the development and uses of alternatives to antibiotic growth promoters in poultry and swine production. Antibiotics 11: 766.
Ramatla, T., T. Mafokwane, K. Lekota, M. Monyama, G. Khasapane, N. Serage, et al. (2023). “One Health” perspective on prevalence of co-existing extended-spectrum β-lactamase (ESBL)-producing Escherichia coli and Klebsiella pneumoniae: a comprehensive systematic review and meta-analysis. Annals of Clinical Microbiology and Antimicrobials 22: 88.
Swelum, A. A., A. R. Elbestawy, M. T. El-Saadony, E. O. Hussein, R. Alhotan, G. M. Suliman, et al. (2021). Ways to minimize bacterial infections, with special reference to Escherichia coli, to cope with the first-week mortality in chicks: an updated overview. Poultry science 100: 101039.
Tan, H.-S., P. Yan, H. A. Agustie, H.-S. Loh, N. Rayamajhi and C.-M. Fang. (2023). Characterisation of ESBL/AmpC-Producing Enterobacteriaceae isolated from poultry farms in Peninsular Malaysia. Letters in Applied Microbiology 76: ovac044.
Thøfner, I. and J.-P. Christensen (2021). Bacterial diseases in poultry. Advancements and technologies in pig and poultry bacterial disease control. Elsevier.
Tian, M., X. He, Y. Feng, W. Wang, H. Chen, M. Gong, et al. (2021). Pollution by antibiotics and antimicrobial resistance in livestock and poultry manure in China, and countermeasures. Antibiotics 10: 539.
Tohmaz, M., M. Askari Badouei, H. Kalateh Rahmani and G. Hashemi Tabar. (2022). Antimicrobial resistance, virulence associated genes and phylogenetic background versus plasmid replicon types: the possible associations in avian pathogenic Escherichia coli (APEC). BMC Veterinary Research 18: 421.
Walk, S. T., E. W. Alm, L. M. Calhoun, J. M. Mladonicky and T. S. Whittam. (2007). Genetic diversity and population structure of Escherichia coli isolated from freshwater beaches. Environmental microbiology 9: 2274-2288.
Wang, M.-G., R.-M. Zhang, L.-L. Wang, R.-Y. Sun, S.-C. Bai, L. Han, et al. (2021). Molecular epidemiology of carbapenemase-producing Escherichia coli from duck farms in south-east coastal China. Journal of Antimicrobial Chemotherapy 76: 322-329.
Yang, F., S. Zhang, X. Shang, L. Wang, H. Li and X. Wang. (2018). Characteristics of quinolone-resistant Escherichia coli isolated from bovine mastitis in China. Journal of dairy science 101: 6244-6252.
Zomorodi, A. R., N. Mohseni, M. Hafiz, H. Nikoueian, G. Hashemitabar, H. Salimizand, et al. (2022). Investigation of mobile colistin resistance (mcr) genes among carbapenem resistance Pseudomonas aeruginosa isolates from bovine mastitis in Mashhad, Iran. Gene Reports 29: 101695.
Zomorodi, A. R., M. Rad, G. R. Hashemitabar and H. Salimizand. (2020). Molecular typing of cephalosporin resistant serovars of Salmonella enterica from poultry and farm animals. Bulgarian Journal of Veterinary Medicine 23: 178-186.
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