Ferdowsi University of Mashhad

Document Type : Research Articles

Authors

Abstract

Agrobacterium tumefaciens is capable of gene transfer to both plant and non-plant organisms. Indeed, upon infection of eukaryotic cells, Agrobacterium tumefaciens transfers a piece of its tumor inducing (Ti)-plasmid, called T-DNA, to the host cell nucleus, which subsequently integrates into the host genome. The VirD2 virulence protein which has relaxase endonuclease activities covalently binds to the 5'end of T-DNA and facilitates its transfer, nuclear localization and integration into the host genome in collaboration with the interacting proteins of the host cell. The VirD2 is essential for Agrobacterium–mediated transformation of both plants and non-plant cells. Here, using yeast Green Flourescent Protein (yGFP) technology, we studied the subcellular localization of VirD2, expressed in the model eukaryote Saccharomyces cerevisiae. Fluorescence microscopy showed that an N-terminal yGFP fusion of VirD2 (i.e. 5' GFP-VirD2 3'), was located in the nucleus of yeast. With C-terminal fusions of VirD2 to yGFP (i.e. 5' VirD2-GFP 3'), no particular subcellular concentration of fluorescence was seen. This further confirms nuclear localization of VirD2 in eukaryotic cells and more importantly highlights the role of Nuclear Localization Signal sequences (NLS) of the C-terminal of VirD2 in this phenomenon.

Keywords

1. Bako, L., Umeda, M., Tiburcio, A. F., Schell, J. and Koncz, C. (2003) The VirD2 pilot protein of Agrobacterium-transferred DNA interacts with the TATA box-binding protein and a nuclear protein kinase in plants. Proc Natl Acad Sci USA 100: 10108–10113.
2. Ballas, N. and Citovsky, V. (1997) Nuclear localization signal binding protein from Arabidopsis mediates nuclear import of Agrobacterium VirD2 protein. Proc Natl Acad Sci USA 94: 10723-8.
3. Bundock, P. (1999) Agrobacterium tumefaciens-mediated transformation of yeasts and fungi. PhD thesis, 119 pp. Leiden University, Leiden, The Netherlands.
4. Citovsky, V., Zupan, J., Warnick, D. and Zambryski, P. (1992) Nuclear localization of Agrobacterium VirE2 protein in plant cells. Science 256: 1802-1805.
5. Citovsky, V., Kozlovsky, S. V., Lacroix, B., Zaltsman, A., Dafny-Yelin, M., Vyas, S., Tovkach, A. and Tzfira T. (2006) Biological systems of the host cell involved in Agrobacterium infection. Cell Microbiol 9: 9-20.
6. Gietz, R. D. and Woods, R. A. (2002) Transformation of yeast by lithium acetate/single-stranded carrier DNA/polyethylene glycol method. Methods Enzymol 350: 87–96.
7. Haghighi Y. M, Soltani J. Nazeri S. (2013) A survey on optimization of Agrobacterium-mediated genetic transformation of the fungus Colletotrichum gloeosporioides. Journal of Cell and Molecular Research. 5(1): 35-41.
8. Hašek, J. and Streiblova, E. (1996) Fluorescence microscopy methods. In: Yeast Protocols: Methods in Cell and Molecular Biology vol. 53, pp.391–406. Edited by I.H. Evans, Humana Press, Totowa, New Jersey, USA.
9. Herrera-Estrella, A., Van Montagu, M. and Wang, K. (1990) A bacterial peptide acting as a plant nuclear targeting signal: the amino-terminal portion of Agrobacterium VirD2 protein directs a beta-galactosidase fusion protein into tobacco nuclei. Proc Natl Acad Sci U S A 87:9534-9537.
10. Howard, E., Zupan, J., Citovsky, V., and Zambryski, P.C. (1992) The VirD2 protein of A. tumefaciens contains a C-terminal bipartite nuclear localization signal: implications for nuclear uptake of DNA in plant cells. Cell 68: 109–118.
11. Li, J., Krichevsky, A., Vaidya, M., Tzfira, T. and Citovsky, V. (2005) Uncoupling of the functions of the Arabidopsis VIP1 protein in transient and stable plant genetic transformation by Agrobacterium. Proc Natl Acad Sci USA 102: 5733–5738.
12. Relić, B., Andjelkovic, M., Rossi, L., Nagamine, Y. and Hohn, B. (1998) Interaction of the DNA modifying proteins VirD1 and VirD2 of Agrobacterium tumefaciens: analysis by subcellular localization in mammalian cells. Proc Natl Acad Sci USA. 95: 9105–9110.
13. Rossi, L., Hohn, B., and Tinland, B. (1993) The VirD2 protein of Agrobacterium tumefaciens carries nuclear localization signals important for transfer of T-DNA to plants. Mol Gen Genet 239: 345–353
14. Sambrook, J., Fritsch, E. F. and Maniatis, T. (1989). Molecular Cloning - A Laboratory Manual, 2nd Edition. Cold Spring Habour Laboratory Press, New York.
15. Sherman, F. (1991) Getting started with yeast. Methods Enzymol 194: 3-21.
16. Soltani, J., van Heusden, G. P. H. and Hooykaas, P. J. J. (2008) Agrobacterium-mediated transformation of non-plant organisms. In Agrobacterium: from biology to biotechnology. pp 649-675. Edited by Tzfira, T. and Citovsky, V. Springer press. New York, USA.
17. Soltani, J., van Heusden, G. P. H. and Hooykaas, P.J.J. (2009) Deletion of host histone acetyltransferases and deacetylases strongly affects Agrobacterium-mediated transformation of Saccharomyces cerevisiae. FEMS Microbiol. Lett., 298: 228-233.
18. Takahashi, R., Valeika, S. A. and Glass, K. W. (1992) A simple method of plasmid transformation of E. coli by rapid freezing. Biotechniques 13:711-715.
19. Tinland, B., Koukolikova-Nicola, Z., Hall, M. N. and Hohn, B. (1992) The T-DNA-linked VirD2 protein contains two distinct functional nuclear localization signals. Proc Natl Acad Sci USA. 89:7442–7446.
20. Tzfira, T., Vaidya, M. and Citovsky, V. (2001) VIP1, an Arabidopsis protein that interacts with Agrobacterium VirE2, is involved in VirE2 nuclear import and Agrobacterium infectivity. EMBO J 20:3596-3607.
21. van Attikum, H., Bundock, P. and Hooykaas, P.J.J. (2001) Non-homologous end-joining proteins are required for Agrobacterium T-DNA integration. EMBO J 20:6550–6558.
22. van Attikum, H. and Hooykaas, P. J. J. (2003) Genetic requirements for the targeted integration of Agrobacterium T-DNA in Saccharomyces cerevisiae. Nucleic Acid Res 31:826–832.
23. van Hemert, M. J., Deelder, A. M., Molenaar, C., Steensma, H. Y. and van Heusden G. P. H. (2003) Self-association of the Spindle Pole Body-related Intermediate Filament Protein Fin1p and Its Phosphorylation-dependent Interaction with 14-3-3 Proteins in Yeast. J Biol Chem 278: 15049-15055.
24. Wang, K., Herrera-Estrella, A. and Van Montagu, M. (1990) Overexpression of virD1 and virD2 genes in Agrobacterium tumefaciens enhances T-complex formation and plant transformation. J Bacteriol 172: 4432–4440.
25. Ziemienowicz, A., Görlich, D., Lanka, E., Hohn, B. and Rossi, L. (1999) Import of DNA into mammalian nuclei by proteins originating from a plant pathogenic bacterium. Proc Natl Acad Sci USA 96: 3729–3733.
26. Ziemienowicz, A., Merkle, T., Schoumacher, F., Hohn, B. and Rossi, L, (2001) Import of Agrobacterium T-DNA into plant nuclei. Two distinct functions of VirD2 and VirE2 proteins. Plant Cell 13: 369–384.
27. Zonneveld B. J. M. (1986) Cheap and simple yeast media. J Microbiol Methods 4: 287-291.
28. Zhu, J., Oger, P. M., Schrammeijer, B., Hooykaas, P.J., Farrand, S.K., and Winans, S.C., 2000. The bases of crown gall tumorigenesis. J Bacteriol 182: 3885–3895.
CAPTCHA Image